Sunday Jul 12, 2009

Important CMS Fixes

In this entry, I would like to talk about some CMS (Concurrent Mark Sweep) issues, their workarounds and the releases these are fixed in.


\* 6558100: CMS crash following parallel work queue overflow.
This crash is seen when -XX:+ParallelRefProcEnabled is set.
Workaround is to use -XX:-ParallelRefProcEnabled.
This is fixed in 1.4.2_17, 5.0u14 and 6u4


\* 6578335: CMS: BigApps failure with -XX:CMSInitiatingOccupancyFraction=1
-XX:+CMSMarkStackOverflowALot.
For clarity sake, this issue was broken into three separate bugs 6722112, 6722113 and 6722116.


\* 6722112: CMS: Incorrect encoding of overflown ObjectArrays during concurrent precleaning.
Workaround is to use -XX:-CMSPrecleaningEnabled and also increasing the size of the marking stack via -XX:CMSMarkStackSize{,Max} would reduce the probability of hitting this bug.
This is fixed in 1.4.2_19-rev-b09, 5.0u18-rev-b03, 6u7-rev-b15 and 6u12.


\* 6722113: CMS: Incorrect overflow handling during Precleaning of Reference lists.
Workaround is to use options -XX:-CMSPrecleanRefLists1 and -XX:-CMSPrecleanRefLists2
This is fixed in 6u14, 5.0u18-rev-b05 and 6u13-rev-b05.


\* 6722116: CMS: Incorrect overflow handling when using parallel concurrent marking.
Workaround is to switch off parallel concurrent marking with -XX:-CMSConcurrentMTEnabled. Also increasing the CMS marking stack size (-XX:CMSMarkStackSize, -XX:CMSMarkStackSizeMax) would reduce the probability of hitting this bug.
This is fixed in 6u7-rev-b15 and 6u12.



So, if you face any of these above crashes, please upgrade to the JDK version in which it is fixed. And if upgrade is not possible, workaround can be used to avoid the issue.

Please note that Java SE for Business support contract is required for using Revision Releases (e.g. 1.4.2_19-rev-b09).

Thursday May 10, 2007

jmap with CMS

Hotspot Servicability Agent, the backbone of jmap tool had a bug due to which jmap was not able to generate correct histogram and heap dump of applications running with Concurrent Mark Sweep collector. This bug 6311411 has been fixed in 5.0u12 and 6.0u2. So starting with these releases, jmap works fine with CMS collector.

Thursday Mar 23, 2006

Understanding CMS GC Logs

CMS GC with -XX:+PrintGCDetails and -XX:+PrintGCTimeStamps prints a lot of information. Understanding this information can help in fine tuning various parameters of the application and CMS to achieve best performance.

Let's have a look at some of the CMS logs generated with 1.4.2_10:

39.910: [GC 39.910: [ParNew: 261760K->0K(261952K), 0.2314667 secs] 262017K->26386K(1048384K), 0.2318679 secs]

Young generation (ParNew) collection. Young generation capacity is 261952K and after the collection its occupancy drops down from 261760K to 0. This collection took 0.2318679 secs.

40.146: [GC [1 CMS-initial-mark: 26386K(786432K)] 26404K(1048384K), 0.0074495 secs]

Beginning of tenured generation collection with CMS collector. This is initial Marking phase of CMS where all the objects directly reachable from roots are marked and this is done with all the mutator threads stopped.

Capacity of tenured generation space is 786432K and CMS was triggered at the occupancy of 26386K.

40.154: [CMS-concurrent-mark-start]

Start of concurrent marking phase.
In Concurrent Marking phase, threads stopped in the first phase are started again and all the objects transitively reachable from the objects marked in first phase are marked here.

40.683: [CMS-concurrent-mark: 0.521/0.529 secs]

Concurrent marking took total 0.521 seconds cpu time and 0.529 seconds wall time that includes the yield to other threads also.

40.683: [CMS-concurrent-preclean-start]

Start of precleaning.
Precleaning is also a concurrent phase. Here in this phase we look at the objects in CMS heap which got updated by promotions from young generation or new allocations or got updated by mutators while we were doing the concurrent marking in the previous concurrent marking phase. By rescanning those objects concurrently, the precleaning phase helps reduce the work in the next stop-the-world “remark” phase.

40.701: [CMS-concurrent-preclean: 0.017/0.018 secs]

Concurrent precleaning took 0.017 secs total cpu time and 0.018 wall time.

40.704: [GC40.704: [Rescan (parallel) , 0.1790103 secs]40.883: [weak refs processing, 0.0100966 secs] [1 CMS-remark: 26386K(786432K)] 52644K(1048384K), 0.1897792 secs]

Stop-the-world phase. This phase rescans any residual updated objects in CMS heap, retraces from the roots and also processes Reference objects. Here the rescanning work took 0.1790103 secs and weak reference objects processing took 0.0100966 secs. This phase took total 0.1897792 secs to complete.

40.894: [CMS-concurrent-sweep-start]

Start of sweeping of dead/non-marked objects. Sweeping is concurrent phase performed with all other threads running.

41.020: [CMS-concurrent-sweep: 0.126/0.126 secs]

Sweeping took 0.126 secs.

41.020: [CMS-concurrent-reset-start]

Start of reset.

41.147: [CMS-concurrent-reset: 0.127/0.127 secs]

In this phase, the CMS data structures are reinitialized so that a new cycle may begin at a later time. In this case, it took 0.127 secs.

This was how a normal CMS cycle runs. Now let us look at some other CMS log entries:

197.976: [GC 197.976: [ParNew: 260872K->260872K(261952K), 0.0000688 secs]197.976: [CMS197.981: [CMS-concurrent-sweep: 0.516/0.531 secs]
(concurrent mode failure): 402978K->248977K(786432K), 2.3728734 secs] 663850K->248977K(1048384K), 2.3733725 secs]

This shows that a ParNew collection was requested, but it was not attempted because it was estimated that there was not enough space in the CMS generation to promote the worst case surviving young generation objects. We name this failure as “full promotion guarantee failure”.

Due to this, Concurrent Mode of CMS is interrupted and a Full GC is invoked at 197.981. This mark-sweep-compact stop-the-world Full GC took 2.3733725 secs and the CMS generation space occupancy dropped from 402978K to 248977K.

The concurrent mode failure can either be avoided by increasing the tenured generation size or initiating the CMS collection at a lesser heap occupancy by setting CMSInitiatingOccupancyFraction to a lower value and setting UseCMSInitiatingOccupancyOnly to true. The value for CMSInitiatingOccupancyFraction should be chosen appropriately because setting it to a very low value will result in too frequent CMS collections.

Sometimes we see these promotion failures even when the logs show that there is enough free space in tenured generation. The reason is 'fragmentation' - the free space available in tenured generation is not contiguous, and promotions from young generation require a contiguous free block to be available in tenured generation. CMS collector is a non-compacting collector, so can cause fragmentation of space for some type of applications. In his blog, Jon talks in detail on how to deal with this fragmentation problem:
http://blogs.sun.com/roller/page/jonthecollector?entry=when_the_sum_of_the

Starting with 1.5, for the CMS collector, the promotion guarantee check is done differently. Instead of assuming that the promotions would be worst case i.e. all of the surviving young generation objects would get promoted into old gen, the expected promotion is estimated based on recent history of promotions. This estimation is usually much smaller than the worst case promotion and hence requires less free space to be available in old generation. And if the promotion in a scavenge attempt fails, then the young generation is left in a consistent state and a stop-the-world mark-compact collection is invoked. To get the same functionality with UseSerialGC you need to explicitly specify the switch -XX:+HandlePromotionFailure.

283.736: [Full GC 283.736: [ParNew: 261599K->261599K(261952K), 0.0000615 secs] 826554K->826554K(1048384K), 0.0003259 secs]
GC locker: Trying a full collection because scavenge failed
283.736: [Full GC 283.736: [ParNew: 261599K->261599K(261952K), 0.0000288 secs]

Stop-the-world GC happening when a JNI Critical section is released. Here again the young generation collection failed due to “full promotion guarantee failure” and then the Full GC is being invoked.

CMS can also be run in incremental mode (i-cms), enabled with -XX:+CMSIncrementalMode. In this mode, CMS collector does not hold the processor for the entire long concurrent phases but periodically stops them and yields the processor back to other threads in application. It divides the work to be done in concurrent phases in small chunks(called duty cycle) and schedules them between minor collections. This is very useful for applications that need low pause times and are run on machines with small number of processors.

Some logs showing the incremental CMS.

2803.125: [GC 2803.125: [ParNew: 408832K->0K(409216K), 0.5371950 secs] 611130K->206985K(1048192K) icms_dc=4 , 0.5373720 secs]
2824.209: [GC 2824.209: [ParNew: 408832K->0K(409216K), 0.6755540 secs] 615806K->211897K(1048192K) icms_dc=4 , 0.6757740 secs]

Here, the scavenges took respectively 537 ms and 675 ms. In between these two scavenges, iCMS ran for a brief period as indicated by the icms_dc value, which indicates a duty-cycle. In this case the duty cycle was 4%. A simple calculation shows that the iCMS incremental step lasted for 4/100 \* (2824.209 - 2803.125 - 0.537) = 821 ms, i.e. 4% of the time between the two scavenges.

Starting with 1.5, CMS has one more phase – concurrent abortable preclean. Abortable preclean is run between a 'concurrent preclean' and 'remark' until we have the desired occupancy in eden. This phase is added to help schedule the 'remark' phase so as to avoid back-to-back pauses for a scavenge closely followed by a CMS remark pause. In order to maximally separate a scavenge from a CMS remark pause, we attempt to schedule the CMS remark pause roughly mid-way between scavenges.

There is a second reason why we do this. Immediately following a scavenge there are likely a large number of grey objects that need rescanning. The abortable preclean phase tries to deal with such newly grey objects thus reducing a subsequent CMS remark pause.

The scheduling of 'remark' phase can be controlled by two jvm options CMSScheduleRemarkEdenSizeThreshold and CMSScheduleRemarkEdenPenetration. The defaults for these are 2m and 50% respectively. The first parameter determines the Eden size below which no attempt is made to schedule the CMS remark pause because the pay off is expected to be minuscule. The second parameter indicates the Eden occupancy at which a CMS remark is attempted.

After 'concurrent preclean' if the Eden occupancy is above CMSScheduleRemarkEdenSizeThreshold, we start 'concurrent abortable preclean' and continue precleanig until we have CMSScheduleRemarkEdenPenetration percentage occupancy in eden, otherwise we schedule 'remark' phase immediately.

7688.150: [CMS-concurrent-preclean-start]
7688.186: [CMS-concurrent-preclean: 0.034/0.035 secs]
7688.186: [CMS-concurrent-abortable-preclean-start]
7688.465: [GC 7688.465: [ParNew: 1040940K->1464K(1044544K), 0.0165840 secs] 1343593K->304365K(2093120K), 0.0167509 secs]
7690.093: [CMS-concurrent-abortable-preclean: 1.012/1.907 secs]
7690.095: [GC[YG occupancy: 522484 K (1044544 K)]7690.095: [Rescan (parallel) , 0.3665541 secs]7690.462: [weak refs processing, 0.0003850 secs] [1 CMS-remark: 302901K(1048576K)] 825385K(2093120K), 0.3670690 secs]

In the above log, after a preclean, 'abortable preclean' starts. After the young generation collection, the young gen occupancy drops down from 1040940K to 1464K. When young gen occupancy reaches 522484K which is 50% of the total capacity, precleaning is aborted and 'remark' phase is started.

Note that in 1.5, young generation occupancy also gets printed in the final remark phase.

For more detailed information and tips on GC tuning, please refer to the following documents:
http://java.sun.com/docs/hotspot/gc5.0/gc_tuning_5.html
http://java.sun.com/docs/hotspot/gc1.4.2/

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