Friday Sep 04, 2009

HL7 Processor Demonstration - GlassFish ESB v2.1

This Note walks the reader through development of a GlassFish ESB v2.1based solution that addresses a Healthcare-related business problem. The Note elaborates on the healthcare background necessary to get a notion of what is being done and why, and provides detailed steps required to implement and exercise the solution to the business problem.

We will use the HL7 Binding Component, the File Binding Component, the JMS Binding Component, the SOAP/HTTP Binding Component, the BPEL 2.0 Service Engine, the JavaEE Service Engine, the HL7 Encoder and EJB-based Web Services in a JBI-based solution. 

This note is an update, for GlassFish ESB v2.1, of the original note  "HL7 Processor Demonstration - Java CAPS 6/JBI and OpenESB".

Updated note is available at http://blogs.czapski.id.au/2009/09/hl7-processor-demonstration-glassfish-esb-v2-1

Monday Jul 20, 2009

GlassFish ESB v2.1, Web Space Server 10 - Creating a Patient Lookup Visual Web JSF Portlet

In some views SOA is represented as a series of 4 layers: Presentation Layer (SOA 1), Business Process Layer (SOA 2), Business Service Layer (SOA 3) and Technical Layer (SOA 4). Typically each layer higher up in the hierarchy consumes services exposed by the layer under it. So the Presentation Layer would consume services provided by the Business Process or Business Service Layers. Service interfaces are described using Web Services Description Language (WSDL), sheltering service consumers from details of service implementation. Web Services are seen as the technical means to implement the decoupled functional layers in a SOA development. Decoupling allows implementations of business functionality at different layers to be swapped in and out without disturbing other layers in the stack. The SOA 1, Presentation Layer, is often implemented as JSR-168-compliant or JSR-286-complaint Portlets, exposed through a standards-based Portal.

The business idea behind the functionality developed in this walkthrough is that patients are looked after in various healthcare facilities. Healthcare workers need to lookup patient details such as their identifier, gender, birth date or address. A relational database holds patient details as well as other information of relevance such as descriptions of various coded values. Patient details are available through a web service. Facility list and details, used to narrow down the search for patients to a specific facility,  are available through a web service. These web services will be used to construct the Portlet that will allow patient search and a display of patient details. This Portlet will be deployed to the Sun FOSS Web Space Server 10 Portal.

Previous documents in this series, see pre-requisites, walked the reader through the process of implementing GlassFish ESB v2.1-based web services which return facility list and facility details as well as patient details.

In this document I will walk through the process of developing a JSR-286-compliant Visual Web JSF Portlet, deployed to the Sun Web Space Server 10 Portal, which will use these Web Service as a data providers. We will use the NetBeans 6.5.1 IDE, which comes as part of the GlassFish ESB v2.1 installation, the Portal Pack 3.0.1 NetBeans Plugin and the JSF Portal Bridge infrastructure provided by the Web Space Server 10. The Portlet will be implemented as a Visual Web JavaServer Faces Portlet using JSF components provided by Project Woodstock.

Note that this document is not a tutorial on JavaServer Faces, Visual Web JSF, Project Woodstock components or Portlet development. Note also that all the components and technologies used are either distributed as part of the NetBeans 6.5, as part of the GalssFish ESB v2.1, as part of the Web Space Server 10 or are readily pluggable into the NetBeans IDE. All are free and open source

The walkthrough document is here: 02_PatientLookup_VWJSFPortlet.pdf
The project archive is here: PatientLookupVWJSFP.zip

Monday Jul 06, 2009

GlassFish ESB v2.1, MySQL v5.1 - Creating a Patient Service Web Service Provider

In some views SOA is represented as a series of 4 layers: Presentation Layer (SOA 1), Business Process Layer (SOA 2), Business Service Layer (SOA 3) and Technical Layer (SOA 4). Typically each layer higher up in the hierarchy consumes services exposed by the layer under it. So the Presentation Layer would consume services provided by the Business Process or Business Service Layers. Service interfaces are described using Web Services Description Language (WSDL), sheltering service consumers from details of service implementation. Web Services are seen as the technical means to implement the decoupled functional layers in a SOA development. Decoupling allows implementations of business functionality at different layers to be swapped in and out without disturbing other layers in the stack.

In this document I will implement a multi-operation Web Service that will allow patient information to be upserted into a database table and will return all patient details for a patient whose Facility+Local ID are specified in the request. This service will be used to populate the patient table and to implement patient lookup portlets, discussed in other writeups in this series. This is a basic Patient Service that hides the specifics of interaction with the patient data store form applications that need to interact with it, by providing a defined interface and web service-based implementation. Thus the data store may change but the service consumers need not. We use the Database BC with select, insert and update operations and Database BC with SQL File-based parameterized SQL prepared statement. We handle null value insertion on missing data. We also use the SOAP/HTTP BC and the BPEL SE.
The business idea is that patients are looked after in various healthcare facilities. Information about patients is stored in a relational database. This information must be inserted, for new patients, and updated, for existing patients, as required. Frequently applications need to search for a patient and display details to human operators. To shelter application developers from the details of the data store the upsert functionality and patient details lookup functionality will be made available as a multi-operation web service.

Walkthrough Document: 02_PatientSvc_GFESBv21.pdf
Companion Archive: 02_PatientSvc_companion_archive.zip

Friday Jul 03, 2009

GlassFish ESB v2.1, MySQL v5.1 - Make HL7 v2.3.1 Delimited Messages from Custom Delimited Records with HL7 Encoder and HL7 BC

“Progress” notwithstanding, Healthcare environments still extensively use the HL7 v2.x Delimited messages for conveyance of patient and patient-related information between applications. The GlassFish ESB provides support for HL7 v2.x messaging in the form of the HL7 Encoder, which allows conversion between HL7 v2 Delimited and HL7 v2 XML message formats, and in the form of the HL7 Binding Component, which allow connectivity between the GlassFish ESB-based healthcare solutions and healthcare applications that support HL7 over TCP connectivity.

In this document I will walk through the process of generating HL7 v2.3.1 delimited messages from pipe-delimited records containing patient information, sending and receiving HL7 v2.3.1 delimited messages using the HL7 Binding Component, parsing HL7 v2.3.1 delimited messages and writing HL7 v2 delimited messages to a file. To create and process HL7 messages I show how create a custom ADT A04 XML Schema and a custom “any HL7 v2 message” XML Schema. This gives me an opportunity to use the File Binding Component (File BC), the HL7 BC, the HL7 Encoder, the Custom Encoder and the BPEL Service Engine (BPEL SE). This also gives me an opportunity to demonstrate a HL7 v2.3.1 delimited message sender solution and to demonstrate a HL7 v2.3.1 delimited message receiver solution. At the end of the process we will have a file containing HL7 v2 delimited ADT A04 messages, which we will use in related writeups. 

The article and referenced materials are available at http://blogs.czapski.id.au/2009/07/glassfish-esb-v2-1-mysql-v5-1-make-hl7-v2-3-1-delimited-messages-from-custom-delimited-records-with-hl7-encoder-and-hl7-bc

Tuesday Jun 30, 2009

Quick Note 003 for JBI-based JMS Publisher and Subscriber example for Leonard Barkley

This Quick Note discusses a simple solution to the use case provided by Leonard Barkley. The question goes like this:

“I dont have any idea how to implement BPEL process but the BPEL deployed as a subscriber of a topic. usually I implement the BPEL process and deployed it as web service.”

We produce a simple GlassFish ESB v2.1-based solution which reads a file, sends its content to a JMS Topic and another simple GlassFish ESB v2.1-based solution which subscribes to the same JMS Topic, receives the message and writes it to a file. Both solutions will use BPEL to implement the simple logic, though it is possible to implement both solutions without BPEL, so we have File BC -> BPEL SE -> JMS BC -> JMS Provider (Topic) -> JMS BC -> BPEL SE -> File BC.

Here is the note: QuickNote003_forLeonardBarkley.pdf

Hire is an archive with the project group containing all the projects developed in the Note: JMSTopicSampleProjGrp.zip

As Leonard Barkley pointed out to me, having implemented the sample, the Note is incorrect on Pages 23 and 24. The JMSSubscriber_JMSIn WSDL should use the Receive type, not Send type as the docuent states. The solution still works, it appears, but the configuration as documented is confusing. Thanks Leonard.


About

In this Blog I post abstracts of articles / writeups / notes on various aspects of Java CAPS and SOA Suite including solutions, discussions and screencasts. The links to the referenced material are included in the bodies of the abstracts.

Search

Categories
Archives
« April 2014
SunMonTueWedThuFriSat
  
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
   
       
Today